SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001000237
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr12:12869486-12902914
Size: 33428
Super-enhancer rank 237
Number of SE elements: 7
ChIP density(Case|Control): 70185.4288|2975.092
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPRC5A ;
ROSE Overlap RPL13AP20 ; GPRC5A ;
ROSE Proximal GPRC5D ; MIR614 ;
ROSE Closest GPRC5A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RPL13AP20 ; GPRC5A ; DDX47 ; LOC100506314 ; MIR614 ; GPRC5D ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000237 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers