SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000173
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr7:73808742-73852839
Size: 44097
Super-enhancer rank 173
Number of SE elements: 7
ChIP density(Case|Control): 84220.8603|7686.1071
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLDN4 ;
ROSE Overlap CLDN4 ; WBSCR27 ;
ROSE Proximal WBSCR28 ; CLDN3 ;
ROSE Closest CLDN4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CLDN3 ; ABHD11 ; WBSCR28 ; WBSCR27 ; CLDN4 ; ABHD11-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000173 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers