SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000171
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr8:66112341-66133420
Size: 21079
Super-enhancer rank 171
Number of SE elements: 5
ChIP density(Case|Control): 79126.3502|2379.8191
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRIM55 ;
ROSE Overlap TRIM55 ;
ROSE Proximal TRIM55 ; CRH ;
ROSE Closest TRIM55 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TRIM55 ; LINC00967 ; CRH ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000171 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers