SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001000160
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr20:31539744-31574616
Size: 34872
Super-enhancer rank 160
Number of SE elements: 13
ChIP density(Case|Control): 81834.1224|2981.556
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PSIMCT-1 ;
ROSE Overlap HM13 ; PSIMCT-1 ;
ROSE Proximal HM13 ; ID1 ; MIR3193 ;
ROSE Closest PSIMCT-1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC00028 ; ID1 ; HM13-AS1 ; MIR3193 ; DEFB124 ; HM13 ; COX4I2 ; REM1 ; MCTS2P ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000160 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers