SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_001000126
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:55471648-55476733
Size: 5085
Super-enhancer rank 126
Number of SE elements: 2
ChIP density(Case|Control): 91695.2625|649.863
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF628 ;
ROSE Overlap ZNF628 ;
ROSE Proximal NAT14 ; SSC5D ; SHISA7 ; ISOC2 ;
ROSE Closest ZNF628 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SSC5D ; NAT14 ; TMEM238 ; RPL28 ; ISOC2 ; SBK2 ; MIR6805 ; SHISA7 ; TMEM190 ; ZNF628 ; UBE2S ; SBK3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000126 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers