SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000112
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr19:46180617-46224675
Size: 44058
Super-enhancer rank 112
Number of SE elements: 16
ChIP density(Case|Control): 97874.847|3304.35
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DKFZP434J0226 ;
ROSE Overlap DKFZp434J0226 ;
ROSE Proximal IGFL1 ; IGFL2 ;
ROSE Closest DKFZp434J0226 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HIF3A ; IGFL2 ; DKFZp434J0226 ; IGFL1 ; IGFL3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000112 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers