SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000081
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr5:1511957-1575999
Size: 64042
Super-enhancer rank 81
Number of SE elements: 16
ChIP density(Case|Control): 115390.8756|7998.8458
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LPCAT1 ;
ROSE Overlap LPCAT1 ; SDHAP3 ;
ROSE Proximal ;
ROSE Closest LPCAT1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR6075 ; SLC6A3 ; LOC728613 ; SDHAP3 ; LPCAT1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000081 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers