SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000065
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr16:1678560-1706120
Size: 27560
Super-enhancer rank 65
Number of SE elements: 4
ChIP density(Case|Control): 117375.284|3243.812
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAPK8IP3 ;
ROSE Overlap HN1L ;
ROSE Proximal MAPK8IP3 ; MIR3177 ;
ROSE Closest MAPK8IP3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MAPK8IP3 ; NME3 ; IFT140 ; SPSB3 ; EME2 ; NUBP2 ; HN1L ; CRAMP1L ; MRPS34 ; MIR3177 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000065 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers