SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000059
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr17:15630656-15660370
Size: 29714
Super-enhancer rank 59
Number of SE elements: 9
ChIP density(Case|Control): 124326.3474|4804.7538
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDRT1 ;
ROSE Overlap TRIM16 ;
ROSE Proximal ZNF286A ; CDRT1 ;
ROSE Closest CDRT1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CDRT1 ; TVP23C ; TVP23C-CDRT4 ; ZNF286A ; TRIM16 ; TBC1D26 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000059 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers