SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000029
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr6:43989031-44079706
Size: 90675
Super-enhancer rank 29
Number of SE elements: 32
ChIP density(Case|Control): 161401.5|4098.51
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C6ORF223 ;
ROSE Overlap C6orf223 ;
ROSE Proximal TMEM63B ; MRPL14 ;
ROSE Closest C6orf223 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC101929705 ; C6orf223 ; TMEM63B ; MRPL14 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000029 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers