SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000017
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr7:101090855-101140001
Size: 49146
Super-enhancer rank 17
Number of SE elements: 11
ChIP density(Case|Control): 206324.7372|7868.2746
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SERPINE1 ;
ROSE Overlap SERPINE1 ;
ROSE Proximal VGF ; TRIM56 ; AP1S1 ; C7orf52 ;
ROSE Closest SERPINE1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC102724094 ; MOGAT3 ; MIR4653 ; AP1S1 ; VGF ; TRIM56 ; MUC17 ; SERPINE1 ; NAT16 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000017 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers