SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000016
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr17:47224914-47316608
Size: 91694
Super-enhancer rank 16
Number of SE elements: 17
ChIP density(Case|Control): 210437.73|10810.7226
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ITGB3 ;
ROSE Overlap ITGB3 ;
ROSE Proximal CDC27 ; MYL4 ; C17orf57 ;
ROSE Closest ITGB3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MYL4 ; LOC102724508 ; EFCAB13 ; CDC27 ; ITGB3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000016 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers