SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_000300048
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF-7_10Gygamma_5h
Genomic region: chr20:63295014-63359470
Size: 64456
Super-enhancer rank 48
Number of SE elements: 22
ChIP density(Case|Control): 31054.9008|5994.408
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: COL20A1;
ROSE Overlap COL20A1; CHRNA4;
ROSE Proximal FLJ16779; ARFGAP1; NKAIN4; MIR4326;
ROSE Closest COL20A1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_000300048 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers