SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_000200202
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF-7_10Gygamma_2.5h
Genomic region: chr17:63768339-63806936
Size: 38597
Super-enhancer rank 202
Number of SE elements: 4
ChIP density(Case|Control): 52383.8484|11779.8044
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DDX42;
ROSE Overlap CCDC47; DDX42;
ROSE Proximal PSMC5; STRADA; FTSJ3; DDX42; SMARCD2;
ROSE Closest DDX42;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_000200202 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers