SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_011100071
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Brain
Biosample name: SK-N-SH
Genomic region: chr17:40297989-40358596
Size: 60607
Super-enhancer rank 71
Number of SE elements: 26
ChIP density(Case|Control): 65928.2946|3969.7585
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RARA;
ROSE Overlap RARA-AS1; RARA; CDC6;
ROSE Proximal RARA; GJD3;
ROSE Closest RARA;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_011100071 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers