SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_009500986
Species: Human
Data source: ENCODE
Biosample type: In vitro differentiated cell
Tissue type: Embryo
Biosample name: neuroepithelial stem cell stably expressing HES5 originated from H9
Genomic region: chr1:119711574-119714481
Size: 2907
Super-enhancer rank 986
Number of SE elements: 1
ChIP density(Case|Control): 10009.0917|338.0841
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PHGDH;
ROSE Overlap PHGDH;
ROSE Proximal ;
ROSE Closest PHGDH;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_009500986 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers