SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_009500164
Species: Human
Data source: ENCODE
Biosample type: In vitro differentiated cell
Tissue type: Embryo
Biosample name: neuroepithelial stem cell stably expressing HES5 originated from H9
Genomic region: chr11:62879681-62890430
Size: 10749
Super-enhancer rank 164
Number of SE elements: 5
ChIP density(Case|Control): 26410.293|1178.0904
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC3A2;
ROSE Overlap SLC3A2;
ROSE Proximal SNORD29; SNHG1; RNU2-2P; SNORD27; SNORD30; SNORD26; SNORD31; WDR74; CHRM1; SNORD22; SNORD28; SLC3A2; STX5; SNORD25;
ROSE Closest SLC3A2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_009500164 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers