SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_008900682
Species: Human
Data source: ENCODE
Biosample type: Tissue
Tissue type: Transverse colon
Biosample name: transverse-colon
Genomic region: chr3:49017259-49023489
Size: 6230
Super-enhancer rank 682
Number of SE elements: 1
ChIP density(Case|Control): 21059.269|873.446
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NDUFAF3;
ROSE Overlap MIR191; DALRD3; MIR425; NDUFAF3;
ROSE Proximal P4HTM; IMPDH2; WDR6;
ROSE Closest NDUFAF3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_008900682 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers