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Super-enhancer overview

SE ID: SE_01_006800260
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Prostate: derived from metastatic site: vertebral metastasis
Biosample name: VCaP
Genomic region: chr1:154973517-154976939
Size: 3422
Super-enhancer rank 260
Number of SE elements: 1
ChIP density(Case|Control): 31242.5178|1525.8698
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR4258;
ROSE Overlap CKS1B; MIR4258; SHC1;
ROSE Proximal PYGO2; PBXIP1; FLAD1; ZBTB7B; PMVK; SHC1; LENEP;
ROSE Closest MIR4258;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_006800260 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers