SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_006800139
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Prostate: derived from metastatic site: vertebral metastasis
Biosample name: VCaP
Genomic region: chr5:174491582-174505910
Size: 14328
Super-enhancer rank 139
Number of SE elements: 2
ChIP density(Case|Control): 42044.0832|3367.08
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MSX2;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest MSX2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_006800139 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers