SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_006400589
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Brain: derived from metastatic site: supra-orbital area
Biosample name: SK-N-MC
Genomic region: chr13:36834900-36858116
Size: 23216
Super-enhancer rank 589
Number of SE elements: 6
ChIP density(Case|Control): 19431.792|2242.6656
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RFXAP;
ROSE Overlap SMAD9;
ROSE Proximal RFXAP;
ROSE Closest RFXAP;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_006400589 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers