SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_005100386
Species: Human
Data source: ENCODE
Biosample type: In vitro differentiated cell
Tissue type: Embryo
Biosample name: neural-progenitor-cell
Genomic region: chr1:149838442-149843926
Size: 5484
Super-enhancer rank 386
Number of SE elements: 1
ChIP density(Case|Control): 7580.1965|1515.4914
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST2H3C;
ROSE Overlap HIST2H2AA4; HIST2H3A;
ROSE Proximal HIST2H2BF; HIST2H4B; HIST2H3D; HIST2H2BE; HIST2H2BC; HIST2H2AB; HIST2H2AC; HIST2H3C; HIST2H2AA3;
ROSE Closest HIST2H3A;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_005100386 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers