SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_004600109
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF-7
Genomic region: chr12:120227563-120266797
Size: 39234
Super-enhancer rank 109
Number of SE elements: 5
ChIP density(Case|Control): 90344.1318|3574.2174
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PXN;
ROSE Overlap PXN;
ROSE Proximal GCN1L1; SIRT4; RPLP0;
ROSE Closest PXN;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004600109 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers