SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_004200363
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue
Biosample name: KMS-11
Genomic region: chr13:114258797-114283471
Size: 24674
Super-enhancer rank 363
Number of SE elements: 4
ChIP density(Case|Control): 24395.1838|2805.4338
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UPF3A ;
ROSE Overlap UPF3A ; CDC16 ;
ROSE Proximal ZNF828 ; CDC16 ; UPF3A ;
ROSE Closest UPF3A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC01054 ; CHAMP1 ; UPF3A ; CDC16 ; MIR4502 ; MIR548AR ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004200363 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers