SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_004200341
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue
Biosample name: KMS-11
Genomic region: chr3:160398548-160405690
Size: 7142
Super-enhancer rank 341
Number of SE elements: 1
ChIP density(Case|Control): 23531.4616|1256.992
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMC4 ;
ROSE Overlap MIR15B ; MIR16-2 ; SMC4 ; IFT80 ;
ROSE Proximal IFT80 ; TRIM59 ;
ROSE Closest SMC4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TRIM59 ; SMC4 ; MIR16-2 ; IFT80 ; MIR15B ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004200341 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers