SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_004200339
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue
Biosample name: KMS-11
Genomic region: chr19:45116237-45140238
Size: 24001
Super-enhancer rank 339
Number of SE elements: 3
ChIP density(Case|Control): 25213.0505|2916.1215
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NKPD1 ;
ROSE Overlap ;
ROSE Proximal NKPD1 ; GEMIN7 ; BLOC1S3 ; ZNF296 ; TRAPPC6A ;
ROSE Closest NKPD1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ZNF296 ; GEMIN7 ; TRAPPC6A ; NKPD1 ; PPP1R37 ; CLASRP ; BLOC1S3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004200339 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers