SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_004200160
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue
Biosample name: KMS-11
Genomic region: chrX:48914055-48942423
Size: 28368
Super-enhancer rank 160
Number of SE elements: 4
ChIP density(Case|Control): 33392.9856|1774.8352
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PIM2 ;
ROSE Overlap OTUD5 ; PIM2 ;
ROSE Proximal PQBP1 ; SLC35A2 ; KCND1 ; TIMM17B ;
ROSE Closest PIM2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLC35A2 ; OTUD5 ; PCSK1N ; PQBP1 ; PIM2 ; GRIPAP1 ; KCND1 ; TIMM17B ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004200160 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers