SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_004200134
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue
Biosample name: KMS-11
Genomic region: chr2:47300011-47335429
Size: 35418
Super-enhancer rank 134
Number of SE elements: 4
ChIP density(Case|Control): 40128.594|4724.7612
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EPCAM ;
ROSE Overlap ;
ROSE Proximal MIR559 ; EPCAM ;
ROSE Closest EPCAM ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC101927043 ; MSH2 ; MIR559 ; EPCAM ; BCYRN1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004200134 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers