SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_004200121
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue
Biosample name: KMS-11
Genomic region: chr1:143726968-143731103
Size: 4135
Super-enhancer rank 121
Number of SE elements: 1
ChIP density(Case|Control): 39884.3919|2975.1462
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC388692 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest LOC388692 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RNVU1-18 ; FAM231D ; RNU1-3 ; RNVU1-17 ; LOC388692 ; RNU1-2 ; RNU1-27P ; RNU1-4 ; RNU1-28P ; RNU1-1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004200121 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers