SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_004200088
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue
Biosample name: KMS-11
Genomic region: chr12:53452186-53494288
Size: 42102
Super-enhancer rank 88
Number of SE elements: 5
ChIP density(Case|Control): 53237.979|12083.274
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCBP2 ;
ROSE Overlap PCBP2 ; MAP3K12 ;
ROSE Proximal TARBP2 ; AMHR2 ; PRR13 ; PCBP2 ; NPFF ;
ROSE Closest PCBP2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PCBP2 ; TARBP2 ; AMHR2 ; SP1 ; PCBP2-OT1 ; NPFF ; PRR13 ; LOC100652999 ; MAP3K12 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004200088 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers