SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_004200056
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue
Biosample name: KMS-11
Genomic region: chr1:154935290-154945410
Size: 10120
Super-enhancer rank 56
Number of SE elements: 1
ChIP density(Case|Control): 53887.988|3389.188
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PMVK ;
ROSE Overlap PMVK ; PBXIP1 ;
ROSE Proximal PYGO2 ; SHC1 ; MIR4258 ; FLAD1 ; CKS1B ; LENEP ;
ROSE Closest PMVK ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FLAD1 ; SHC1 ; KCNN3 ; DCST1 ; DCST2 ; CKS1B ; PYGO2 ; ZBTB7B ; PMVK ; MIR4258 ; LENEP ; PBXIP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004200056 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers