SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_004000088
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue
Biosample name: Karpas-422
Genomic region: chr3:58320985-58430556
Size: 109571
Super-enhancer rank 88
Number of SE elements: 17
ChIP density(Case|Control): 161715.8389|10781.7864
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PXK;
ROSE Overlap PDHB; PXK;
ROSE Proximal RPP14;
ROSE Closest PXK;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004000088 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers