SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900682
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr9:120895473-120900340
Size: 4867
Super-enhancer rank 682
Number of SE elements: 3
ChIP density(Case|Control): 22373.599|1427.0044
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRAF1 ;
ROSE Overlap ;
ROSE Proximal PHF19 ; TRAF1 ;
ROSE Closest TRAF1 ;
Lasso ;
PreSTIGE LOC100288842 ; LOC253039 ; PHF19 ; PSD5 ;
ABC ;
BETA PSMD5 ; PHF19 ; TRAF1 ; PSMD5-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900682 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers