SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900672
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:3323697-3356971
Size: 33274
Super-enhancer rank 672
Number of SE elements: 4
ChIP density(Case|Control): 27713.9146|6468.4656
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PSMG4 ;
ROSE Overlap SLC22A23 ;
ROSE Proximal ;
ROSE Closest PSMG4 ;
Lasso ;
PreSTIGE PSG4 ;
ABC PSMG4 ; TUBB2B ; BPHL ; SLC22A23 ; LINC01600 ; FAM50B ; GMDS-AS1 ; GMDS ;
BETA PSMG4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900672 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers