SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900657
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr3:38163489-38166634
Size: 3145
Super-enhancer rank 657
Number of SE elements: 1
ChIP density(Case|Control): 22363.466|955.7655
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: OXSR1 ;
ROSE Overlap OXSR1 ;
ROSE Proximal MYD88 ; ACAA1 ;
ROSE Closest OXSR1 ;
Lasso ACAA1 ; ACVR2B ; YD88 ; XYLB ;
PreSTIGE ACAA1 ; YD88 ; OXSR1 ;
ABC ;
BETA OXSR1 ; ACAA1 ; MYD88 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900657 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers