SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900654
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:26052372-26066616
Size: 14244
Super-enhancer rank 654
Number of SE elements: 3
ChIP density(Case|Control): 24125.0628|2613.774
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H1C ;
ROSE Overlap HIST1H1C ;
ROSE Proximal HIST1H3B ; HIST1H1A ; HIST1H4A ; HFE ; HIST1H3C ; HIST1H4B ; HIST1H2AB ; HIST1H1T ; HIST1H3A ; HIST1H2BB ; HIST1H4C ;
ROSE Closest HIST1H1C ;
Lasso BTN2A2 ; HIST1H1E ; HIST1H1T ; HIST1H2AB ; HIST1H2AC ; HIST1H2BB ; HIST1H3A ; HIST1H3B ; HIST1H3C ; HIST1H4A ; HIST1H4B ;
PreSTIGE ;
ABC HIST1H3C ; HIST1H4C ; HFE ; HIST1H1C ; HIST1H2AB ; HIST1H3B ; HIST1H1T ; HIST1H2BC ; HIST1H2AC ;
BETA HIST1H3B ; HIST1H2BC ; HIST1H4C ; TRIM38 ; HFE ; HIST1H2BD ; HIST1H2AB ; HIST1H2AC ; HIST1H4A ; HIST1H1A ; HIST1H2BB ; HIST1H3C ; HIST1H1C ; HIST1H4B ; HIST1H1E ; HIST1H3A ; HIST1H1T ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900654 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers