SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900646
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr5:139686009-139710953
Size: 24944
Super-enhancer rank 646
Number of SE elements: 7
ChIP density(Case|Control): 24901.5952|3185.3488
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CXXC5 ;
ROSE Overlap ;
ROSE Proximal CXXC5 ;
ROSE Closest CXXC5 ;
Lasso ;
PreSTIGE ;
ABC PFDN1 ;
BETA CXXC5 ; LOC101929696 ; PSD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900646 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers