SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900643
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr4:74053906-74065760
Size: 11854
Super-enhancer rank 643
Number of SE elements: 3
ChIP density(Case|Control): 23965.2318|2174.0236
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPBPL2 ;
ROSE Overlap PPBPL2 ;
ROSE Proximal CXCL2 ; CXCL3 ;
ROSE Closest PPBPL2 ;
Lasso CXCL2 ; CXCL3 ; PPBP ;
PreSTIGE CXCL2 ; CXCL3 ; THFD2L ;
ABC ;
BETA PF4 ; CXCL2 ; CXCL5 ; PPBP ; CXCL3 ; PPBPP2 ; MTHFD2L ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900643 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers