SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900637
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:28349377-28357941
Size: 8564
Super-enhancer rank 637
Number of SE elements: 2
ChIP density(Case|Control): 24109.3728|2161.5536
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF323 ;
ROSE Overlap ZNF323 ; ZKSCAN3 ;
ROSE Proximal ZNF323 ; ZSCAN12 ;
ROSE Closest ZNF323 ;
Lasso ;
PreSTIGE PGBD1 ; TOB2P1 ; ZKSCAN3 ; ZKSCAN4 ; ZNF192 ; ZNF193 ; ZNF323 ; ZSCAN12 ;
ABC ;
BETA ZSCAN31 ; ZSCAN26 ; ZSCAN23 ; PGBD1 ; ZKSCAN4 ; ZSCAN12 ; ZKSCAN3 ; NKAPL ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900637 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers