SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900633
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr17:28723860-28729495
Size: 5635
Super-enhancer rank 633
Number of SE elements: 1
ChIP density(Case|Control): 23453.4335|1373.2495
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TLCD1 ;
ROSE Overlap TLCD1 ; RPL23A ; NEK8 ;
ROSE Proximal RAB34 ; SNORD42A ; PROCA1 ; SNORD4A ; SNORD4B ; TRAF4 ; SNORD42B ;
ROSE Closest TLCD1 ;
Lasso DHRS13 ; FLOT2 ; KIAA0100 ; PHF12 ; PIPOX ; SDF2 ; SUPT6H ;
PreSTIGE ;
ABC ;
BETA PROCA1 ; TRAF4 ; SNORD42A ; KIAA0100 ; NEK8 ; RAB34 ; SNORD4B ; SNORD4A ; FAM222B ; SDF2 ; RPL23A ; SNORD42B ; TLCD1 ; NARR ; SUPT6H ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900633 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers