SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900630
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr2:85413484-85439265
Size: 25781
Super-enhancer rank 630
Number of SE elements: 5
ChIP density(Case|Control): 25265.38|3085.9857
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SH2D6 ;
ROSE Overlap SH2D6 ;
ROSE Proximal CAPG ;
ROSE Closest SH2D6 ;
Lasso C2orf68 ; ELOD3 ; GGCX ; AT2A ; RETSAT ; RNF181 ; VAP8 ;
PreSTIGE LOC100630918 ; AT2A ;
ABC ;
BETA TGOLN2 ; ELMOD3 ; SH2D6 ; CAPG ; RETSAT ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900630 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers