SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900628
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:36422709-36445045
Size: 22336
Super-enhancer rank 628
Number of SE elements: 3
ChIP density(Case|Control): 25773.5104|3531.3216
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KCTD20 ;
ROSE Overlap KCTD20 ; PXT1 ;
ROSE Proximal ETV7 ;
ROSE Closest KCTD20 ;
Lasso KCTD20 ; PXT1 ; SRSF3 ; STK38 ;
PreSTIGE KCTD20 ;
ABC ;
BETA ETV7 ; KCTD20 ; C6orf222 ; PXT1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900628 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers