SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900626
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr7:130131145-130153295
Size: 22150
Super-enhancer rank 626
Number of SE elements: 4
ChIP density(Case|Control): 27286.585|5019.19
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM209 ;
ROSE Overlap KLHDC10 ;
ROSE Proximal ;
ROSE Closest TMEM209 ;
Lasso KLHDC10 ; SSE1 ; TE209 ; ZC3HC1 ;
PreSTIGE KLHDC10 ; TE209 ; ZC3HC1 ;
ABC ;
BETA KLHDC10 ; ZC3HC1 ; TMEM209 ; SSMEM1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900626 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers