SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900616
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:12931559-12941293
Size: 9734
Super-enhancer rank 616
Number of SE elements: 2
ChIP density(Case|Control): 23950.507|1499.036
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CALR ;
ROSE Overlap FARSA ; CALR ;
ROSE Proximal KLF1 ; GADD45GIP1 ; GCDH ; SYCE2 ; RAD23A ; DAND5 ;
ROSE Closest CALR ;
Lasso ;
PreSTIGE DAND5 ; GADD45GIP1 ; KLF1 ; AST1 ; SYCE2 ;
ABC RTBDN ;
BETA GCDH ; GADD45GIP1 ; NFIX ; MIR6794 ; DAND5 ; FARSA ; RAD23A ; MIR5695 ; MAST1 ; DNASE2 ; MIR6515 ; KLF1 ; CALR ; SYCE2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900616 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers