SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900612
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:26069242-26079743
Size: 10501
Super-enhancer rank 612
Number of SE elements: 3
ChIP density(Case|Control): 24318.2158|1816.673
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRIM63 ;
ROSE Overlap ;
ROSE Proximal SLC30A2 ; TRIM63 ; EXTL1 ; PDIK1L ;
ROSE Closest TRIM63 ;
Lasso ;
PreSTIGE FA110D ; PDIK1L ; ZNF593 ;
ABC ;
BETA TRIM63 ; ZNF593 ; SLC30A2 ; PDIK1L ; EXTL1 ; PAFAH2 ; FAM110D ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900612 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers