SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900601
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr11:64267718-64274414
Size: 6696
Super-enhancer rank 601
Number of SE elements: 2
ChIP density(Case|Control): 23478.8544|744.5952
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPR137 ;
ROSE Overlap BAD ; PLCB3 ;
ROSE Proximal PRDX5 ; GPR137 ; TRMT112 ; PLCB3 ; ESRRA ; FKBP2 ; C11orf20 ; NUDT22 ; KCNK4 ; VEGFB ; TRPT1 ; DNAJC4 ; PPP1R14B ;
ROSE Closest GPR137 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TRPT1 ; NUDT22 ; ESRRA ; GPR137 ; BAD ; VEGFB ; PRDX5 ; KCNK4 ; TRMT112 ; STIP1 ; CCDC88B ; FERMT3 ; FKBP2 ; DNAJC4 ; MIR7155 ; RPS6KA4 ; PLCB3 ; PPP1R14B ; MIR1237 ; TEX40 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900601 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers