SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900598
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:30679761-30688902
Size: 9141
Super-enhancer rank 598
Number of SE elements: 2
ChIP density(Case|Control): 24507.9351|1694.7414
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KIAA1949 ;
ROSE Overlap KIAA1949 ; NRM ;
ROSE Proximal MDC1 ; TUBB ; DHX16 ; C6orf136 ;
ROSE Closest KIAA1949 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NRM ; PPP1R10 ; PPP1R18 ; ATAT1 ; C6orf136 ; TUBB ; FLOT1 ; MDC1 ; MRPS18B ; DHX16 ; IER3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900598 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers