SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900593
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr3:196498862-196529549
Size: 30687
Super-enhancer rank 593
Number of SE elements: 6
ChIP density(Case|Control): 25847.6601|2945.952
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C3ORF43 ;
ROSE Overlap C3orf43 ; RNF168 ;
ROSE Proximal FBXO45 ; WDR53 ;
ROSE Closest C3orf43 ;
Lasso FBXO45 ; RNF168 ; SCO1 ; TFRC ; UBXN7 ; WDR53 ;
PreSTIGE FBXO45 ; RNF168 ; WDR53 ;
ABC ;
BETA RNF168 ; SMCO1 ; WDR53 ; FBXO45 ; UBXN7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900593 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers