SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900587
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:26155143-26174186
Size: 19043
Super-enhancer rank 587
Number of SE elements: 3
ChIP density(Case|Control): 26481.1958|3494.3905
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H2BD ;
ROSE Overlap HIST1H2BD ; HIST1H1E ;
ROSE Proximal HIST1H2BG ; HIST1H4D ; HIST1H2AC ; HIST1H2BE ; HIST1H3D ; HIST1H2BC ; HIST1H4E ; HIST1H2BF ; HIST1H2AE ; HIST1H1T ; HIST1H2AD ;
ROSE Closest HIST1H2BD ;
Lasso HIST1H1E ; HIST1H1T ; HIST1H2AC ; HIST1H2AD ; HIST1H2AE ; HIST1H2AH ; HIST1H2BC ; HIST1H2BG ; HIST1H2BH ; HIST1H2BK ; HIST1H3D ; HIST1H3F ; HIST1H4C ; HIST1H4D ; HIST1H4E ;
PreSTIGE HIST1H1D ; HIST1H1E ; HIST1H1T ; HIST1H2AC ; HIST1H2AD ; HIST1H2AE ; HIST1H2BC ; HIST1H2BD ; HIST1H2BE ; HIST1H2BF ; HIST1H2BG ; HIST1H3D ; HIST1H4C ; HIST1H4D ; HIST1H4E ;
ABC HIST1H2BD ; HIST1H1E ;
BETA HIST1H4E ; HIST1H2BE ; HIST1H3E ; HIST1H2BC ; HIST1H4C ; HIST1H4G ; HFE ; HIST1H2AD ; HIST1H4F ; HIST1H2AE ; HIST1H3F ; HIST1H2BD ; HIST1H2BG ; HIST1H2AC ; HIST1H2BH ; HIST1H4D ; HIST1H3D ; HIST1H2BF ; HIST1H1E ; HIST1H1D ; HIST1H1T ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900587 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers