SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900580
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:161204416-161230015
Size: 25599
Super-enhancer rank 580
Number of SE elements: 4
ChIP density(Case|Control): 29315.9748|6200.0778
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NCRNA00241 ;
ROSE Overlap AGPAT4 ;
ROSE Proximal NCRNA00241 ;
ROSE Closest NCRNA00241 ;
Lasso AGPAT4 ; AP3K4 ;
PreSTIGE AGPAT4 ;
ABC ;
BETA AGPAT4-IT1 ; AGPAT4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900580 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers